Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lyttr family dna-binding domain-containing protein | SLIN_RS02480 | Not Available | + | 620633 - 621052 | 16479.1 |
| outer membrane beta-barrel protein | SLIN_RS02485 | Not Available | - | 621164 - 621838 | 24198.9 |
| dna repair protein rada | SLIN_RS02490 | P37572 | + | 622055 - 623440 | 49985.3 |
| alpha/beta fold hydrolase | SLIN_RS02495 | P22862 | + | 623543 - 624436 | 32469.0 |
| arac family transcriptional regulator | SLIN_RS02500 | Not Available | - | 624586 - 625473 | 33743.4 |
| sugar phosphate isomerase/epimerase | SLIN_RS02505 | Q98FW0 | + | 625609 - 626478 | 32024.9 |
| gfo/idh/moca family protein | SLIN_RS02510 | Not Available | + | 626588 - 627703 | 41510.3 |
| pvc-type heme-binding cxxch protein | SLIN_RS02515 | Not Available | + | 627737 - 631534 | 139171.0 |
| sensor histidine kinase kdpd | SLIN_RS02520 | Q08408 | - | 631610 - 632521 | 34255.9 |
| hypothetical protein | SLIN_RS02525 | Not Available | - | 632749 - 633159 | 14465.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)