Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS02430 | Not Available | - | 608404 - 608649 | 9124.66 |
| atp-dependent chaperone clpb | SLIN_RS02435 | Q89YY3 | - | 609621 - 612242 | 97453.5 |
| tspo/mbr family protein | SLIN_RS02440 | Not Available | - | 612619 - 613569 | 35095.3 |
| sdr family oxidoreductase | SLIN_RS02445 | Q6QA33 | - | 613654 - 614736 | 39119.8 |
| duf4136 domain-containing protein | SLIN_RS02450 | Not Available | + | 614895 - 615458 | 20954.9 |
| duf937 domain-containing protein | SLIN_RS02455 | Not Available | - | 615519 - 616856 | 47454.2 |
| exodeoxyribonuclease vii small subunit | SLIN_RS02460 | Not Available | - | 617005 - 617193 | 7312.7 |
| exodeoxyribonuclease vii large subunit | SLIN_RS02465 | B8HMX6 | - | 617253 - 618467 | 45691.6 |
| phenylalanine--trna ligase subunit alpha | SLIN_RS02470 | Q11Q26 | - | 618555 - 619595 | 39798.6 |
| lyttr family dna-binding domain-containing protein | SLIN_RS02475 | Not Available | + | 619950 - 620381 | 16632.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)