Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-aminoacyl-trna deacylase | SLIN_RS02330 | Q650H8 | + | 587122 - 587574 | 16375.0 |
| o-methyltransferase | SLIN_RS02335 | Q00719 | + | 587665 - 588309 | 24423.4 |
| lysm peptidoglycan-binding domain-containing protein | SLIN_RS02340 | Not Available | + | 588324 - 590729 | 87632.1 |
| duf3109 family protein | SLIN_RS02345 | Not Available | + | 590838 - 591425 | 21923.9 |
| mgmt family protein | SLIN_RS02350 | Not Available | + | 591460 - 591795 | 12607.3 |
| nadph-dependent fmn reductase | SLIN_RS02355 | P0AGE7 | - | 591808 - 592353 | 19307.5 |
| bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase | SLIN_RS02360 | Q31GG8 | - | 592371 - 592937 | 21198.8 |
| hypothetical protein | SLIN_RS02365 | Not Available | - | 593049 - 593951 | 34090.4 |
| outer membrane beta-barrel protein | SLIN_RS02370 | Not Available | - | 594182 - 595081 | 31661.4 |
| glucose-6-phosphate isomerase | SLIN_RS02375 | B8FK51 | - | 595241 - 596899 | 62144.8 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)