Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS02130 | Not Available | - | 538538 - 538933 | 15509.9 |
| type 1 glutamine amidotransferase domain-containing protein | SLIN_RS02135 | Q5AF03 | + | 539202 - 539894 | 26308.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SLIN_RS02140 | P37780 | - | 539908 - 540453 | 20517.4 |
| orotidine-5'-phosphate decarboxylase | SLIN_RS02145 | A0LYL6 | + | 540564 - 541403 | 30532.1 |
| duf2851 family protein | SLIN_RS02150 | Not Available | + | 541512 - 542801 | 48747.6 |
| gfo/idh/moca family protein | SLIN_RS02155 | Not Available | - | 542894 - 544219 | 49633.5 |
| duf1080 domain-containing protein | SLIN_RS02160 | Not Available | - | 544279 - 545022 | 27528.6 |
| sugar phosphate isomerase/epimerase | SLIN_RS02165 | Not Available | - | 545113 - 546039 | 33582.5 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS02170 | Not Available | - | 546253 - 547938 | 62724.4 |
| tonb-dependent receptor | SLIN_RS02175 | Not Available | - | 547991 - 551095 | 112741.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)