Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | SLIN_RS02030 | A9ALD1 | - | 516789 - 517643 | 31134.8 |
| uma2 family endonuclease | SLIN_RS02035 | Not Available | + | 517825 - 518436 | 23794.2 |
| sdr family nad(p)-dependent oxidoreductase | SLIN_RS02040 | P46331 | - | 518527 - 519300 | 27053.4 |
| uxaa family hydrolase | SLIN_RS02045 | Not Available | - | 519388 - 521061 | 60312.0 |
| hypothetical protein | SLIN_RS02050 | Not Available | + | 521255 - 522403 | 42977.1 |
| adenine deaminase | SLIN_RS02055 | A6GYI0 | + | 522408 - 524063 | 59867.3 |
| rna polymerase sigma factor | SLIN_RS02060 | Not Available | + | 524166 - 524765 | 23117.5 |
| replication-associated recombination protein a | SLIN_RS02065 | P39918 | + | 524951 - 526222 | 46543.2 |
| lyttr family dna-binding domain-containing protein | SLIN_RS02070 | Q8D4U6 | - | 526249 - 526932 | 26087.8 |
| sensor histidine kinase | SLIN_RS02075 | Q5HLG3 | - | 526938 - 527960 | 39473.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)