Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system phd/yefm family antitoxin | SLIN_RS01930 | Not Available | + | 494230 - 494484 | 9771.51 |
| hypothetical protein | SLIN_RS01935 | Not Available | + | 494792 - 495400 | 21997.5 |
| ompa family protein | SLIN_RS01940 | Not Available | + | 495480 - 496679 | 42990.9 |
| gfo/idh/moca family protein | SLIN_RS01945 | Not Available | - | 496957 - 498363 | 51091.9 |
| nipsnap family protein | SLIN_RS01950 | Not Available | - | 498419 - 499207 | 29904.7 |
| alpha-e domain-containing protein | SLIN_RS01955 | Not Available | + | 499457 - 500419 | 37547.6 |
| hypothetical protein | SLIN_RS01960 | Not Available | - | 500487 - 501260 | 28473.1 |
| 1,4-alpha-glucan branching protein glgb | SLIN_RS01965 | O66936 | - | 501369 - 503381 | 76731.4 |
| putative maltokinase | SLIN_RS01970 | Q7WUM3 | - | 503570 - 505246 | 64166.5 |
| duf4440 domain-containing protein | SLIN_RS01975 | Not Available | - | 505475 - 505927 | 17135.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)