Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf885 family protein | SLIN_RS01880 | Not Available | - | 480343 - 482073 | 65035.8 |
| outer membrane beta-barrel protein | SLIN_RS01885 | Not Available | + | 482502 - 483116 | 21465.7 |
| hypothetical protein | SLIN_RS01890 | Not Available | - | 483216 - 484397 | 45455.2 |
| atp-binding protein | SLIN_RS01895 | Q9R6X3 | + | 484613 - 486853 | 84397.8 |
| response regulator | SLIN_RS01900 | Not Available | + | 486862 - 487293 | 16119.3 |
| biliverdin-producing heme oxygenase | SLIN_RS01905 | Not Available | + | 487290 - 487874 | 22070.8 |
| atp-binding protein | SLIN_RS01910 | P37894 | - | 487899 - 489923 | 76049.1 |
| low affinity iron permease family protein | SLIN_RS01915 | Not Available | - | 490216 - 490707 | 18573.2 |
| duf255 domain-containing protein | SLIN_RS01920 | Not Available | - | 490810 - 492210 | 52631.6 |
| abc transporter atp-binding protein | SLIN_RS01925 | P33116 | + | 492320 - 494170 | 68853.8 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)