Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nrtr dna-binding winged helix domain-containing protein | SLIN_RS01730 | Not Available | - | 444993 - 445694 | 27043.6 |
| endo-1,4-beta-xylanase | SLIN_RS01735 | Q12603 | - | 445898 - 446980 | 41550.5 |
| laci family dna-binding transcriptional regulator | SLIN_RS01740 | O07567 | + | 447530 - 448549 | 37631.3 |
| glycoside hydrolase family 43 protein | SLIN_RS01745 | P49943 | + | 448588 - 449628 | 38991.3 |
| glycoside hydrolase family 20 zincin-like fold domain-containing protein | SLIN_RS01750 | Not Available | - | 449778 - 451955 | 82357.4 |
| polysaccharide deacetylase family protein | SLIN_RS01755 | Not Available | - | 451964 - 452761 | 29303.4 |
| hypothetical protein | SLIN_RS01760 | Not Available | - | 453130 - 453510 | 13809.8 |
| nudix hydrolase | SLIN_RS01765 | Not Available | + | 453679 - 454452 | 29976.8 |
| glycosyl hydrolase | SLIN_RS01770 | Not Available | + | 454680 - 458024 | 122319.0 |
| nad-dependent epimerase/dehydratase family protein | SLIN_RS01775 | A0A221J5W8 | + | 458356 - 459426 | 40210.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)