Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | SLIN_RS01680 | Not Available | - | 434355 - 435458 | 42149.6 |
| uma2 family endonuclease | SLIN_RS01685 | Not Available | - | 435587 - 436105 | 19505.0 |
| duf2141 domain-containing protein | SLIN_RS01690 | Not Available | + | 436409 - 436858 | 16403.6 |
| dinb family protein | SLIN_RS01695 | Not Available | + | 436897 - 437451 | 20973.7 |
| aspartate carbamoyltransferase catalytic subunit | SLIN_RS01700 | Q11YY8 | - | 437454 - 438377 | 33852.2 |
| arylsulfatase | SLIN_RS01705 | Q08DD1 | - | 438515 - 439939 | 52391.3 |
| m20/m25/m40 family metallo-hydrolase | SLIN_RS01710 | P81715 | - | 439953 - 440879 | 33656.5 |
| alpha-amylase family glycosyl hydrolase | SLIN_RS01715 | Not Available | - | 441008 - 442495 | 56796.3 |
| fructose-6-phosphate aldolase | SLIN_RS01720 | Q11S31 | - | 442692 - 443351 | 23712.8 |
| xylose isomerase | SLIN_RS01725 | A6L792 | - | 443455 - 444786 | 49580.2 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)