Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lyttr family dna-binding domain-containing protein | SLIN_RS01630 | Not Available | - | 420960 - 421724 | 28681.7 |
| sensor histidine kinase | SLIN_RS01635 | Not Available | - | 421721 - 422788 | 40527.9 |
| outer membrane beta-barrel protein | SLIN_RS01640 | Not Available | + | 423043 - 425652 | 93384.9 |
| ycei family protein | SLIN_RS01645 | B4T2Y8 | + | 425722 - 426321 | 21484.7 |
| sugar phosphate isomerase/epimerase | SLIN_RS01650 | Not Available | + | 426471 - 427427 | 34616.5 |
| pqq-dependent sugar dehydrogenase | SLIN_RS01655 | Not Available | + | 427545 - 430394 | 102875.0 |
| flavin-dependent oxidoreductase | SLIN_RS01660 | A0A172J1S0 | - | 430524 - 431762 | 45744.8 |
| lysr substrate-binding domain-containing protein | SLIN_RS01665 | Q04778 | + | 431881 - 432783 | 33410.0 |
| lipocalin family protein | SLIN_RS01670 | Not Available | + | 432950 - 433462 | 18501.6 |
| uracil-dna glycosylase family protein | SLIN_RS01675 | Not Available | - | 433545 - 434237 | 26115.9 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)