Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | SLIN_RS01480 | Not Available | - | 390484 - 391275 | 28353.0 |
| sgnh/gdsl hydrolase family protein | SLIN_RS01485 | Not Available | - | 391286 - 392632 | 46692.8 |
| peptidoglycan-binding protein lysm | SLIN_RS01490 | P0ADE7 | + | 392854 - 393321 | 16729.1 |
| duf937 domain-containing protein | SLIN_RS01495 | Not Available | + | 393510 - 394421 | 32249.3 |
| hypothetical protein | SLIN_RS01500 | Not Available | + | 394522 - 394809 | 9960.65 |
| serine protease | SLIN_RS01505 | Not Available | + | 394978 - 395862 | 33430.0 |
| m20 family metallo-hydrolase | SLIN_RS01510 | C5GFX4 | + | 395970 - 397052 | 39789.3 |
| sigma-70 family rna polymerase sigma factor | SLIN_RS01515 | Not Available | - | 397107 - 397598 | 19131.9 |
| alpha-l-fucosidase | SLIN_RS01520 | Q8GW72 | + | 398192 - 399556 | 50692.0 |
| type i phosphomannose isomerase catalytic subunit | SLIN_RS01525 | O05511 | + | 399645 - 400625 | 36456.9 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)