Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated abc transporter permease subunit gldf | SLIN_RS32540 | Not Available | + | 8058215 - 8058937 | 26377.9 |
| vanz family protein | SLIN_RS32545 | Not Available | + | 8058937 - 8059293 | 13297.9 |
| tetratricopeptide repeat protein | SLIN_RS32550 | Not Available | - | 8059366 - 8060742 | 51033.4 |
| phosphogluconate dehydrogenase (nad(+)-dependent, decarboxylating) | SLIN_RS32555 | P54448 | + | 8061051 - 8061947 | 32221.8 |
| fatty acid desaturase | SLIN_RS32560 | Not Available | + | 8062107 - 8063192 | 42235.4 |
| dna/rna non-specific endonuclease | SLIN_RS32565 | P38446 | - | 8063292 - 8064161 | 31436.8 |
| hypothetical protein | SLIN_RS32570 | Q8BG19 | + | 8064287 - 8066308 | 76473.8 |
| duf3472 domain-containing protein | SLIN_RS32575 | Not Available | - | 8066425 - 8067729 | 48552.1 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS32580 | Not Available | - | 8067803 - 8069254 | 54105.3 |
| tonb-dependent receptor | SLIN_RS32585 | Not Available | - | 8069267 - 8072245 | 108792.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)