Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | SLIN_RS32190 | Q89AH2 | - | 7956010 - 7956732 | 27271.0 |
| 50s ribosomal protein l28 | SLIN_RS32195 | Q11XD1 | - | 7956902 - 7957141 | 8956.86 |
| ornithine--oxo-acid transaminase | SLIN_RS32200 | Q9VW26 | + | 7957489 - 7958742 | 45535.8 |
| nadph-dependent f420 reductase | SLIN_RS32205 | Q687X5 | + | 7958813 - 7959421 | 20809.1 |
| arabinose isomerase | SLIN_RS32210 | Not Available | - | 7959437 - 7960846 | 51409.9 |
| response regulator | SLIN_RS32215 | Not Available | + | 7961246 - 7963837 | 97251.3 |
| yhjd/yihy/brkb family envelope integrity protein | SLIN_RS32220 | Not Available | - | 7963866 - 7964825 | 34914.1 |
| gmc oxidoreductase | SLIN_RS32225 | Not Available | - | 7965064 - 7966773 | 63558.0 |
| gluconate 2-dehydrogenase subunit 3 family protein | SLIN_RS32230 | Not Available | - | 7966911 - 7967438 | 18995.7 |
| rna polymerase sigma factor | SLIN_RS32235 | Not Available | + | 7967812 - 7968402 | 22853.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)