Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | SLIN_RS32140 | Q8KP10 | - | 7942599 - 7943165 | 21284.3 |
| alpha/beta hydrolase | SLIN_RS32145 | A0A0K2VM55 | - | 7943185 - 7944450 | 46964.8 |
| hypothetical protein | SLIN_RS32150 | Not Available | + | 7944729 - 7945364 | 23420.7 |
| pyrimidine-specific ribonucleoside hydrolase riha | SLIN_RS32155 | B7MRT1 | - | 7945511 - 7946449 | 34224.8 |
| m28 family metallopeptidase | SLIN_RS32160 | Not Available | + | 7946639 - 7948294 | 59890.4 |
| tolc family protein | SLIN_RS32165 | Not Available | + | 7948490 - 7949791 | 48809.3 |
| efflux rnd transporter periplasmic adaptor subunit | SLIN_RS32170 | Not Available | + | 7949794 - 7950753 | 35043.9 |
| efflux rnd transporter permease subunit | SLIN_RS32175 | Not Available | + | 7950872 - 7954054 | 115118.0 |
| nad(p)h-quinone oxidoreductase | SLIN_RS32180 | P96285 | - | 7954356 - 7955318 | 34103.1 |
| dinb family protein | SLIN_RS32185 | Not Available | + | 7955411 - 7955911 | 18960.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)