Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS32040 | Not Available | + | 7918689 - 7918883 | 7342.1 |
| response regulator transcription factor | SLIN_RS32045 | P9WGM4 | + | 7919392 - 7920039 | 23978.3 |
| atp-binding protein | SLIN_RS32050 | Not Available | + | 7920091 - 7921845 | 66574.9 |
| tonb-dependent receptor | SLIN_RS32055 | Not Available | + | 7921930 - 7925157 | 116559.0 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS32060 | A7LXT5 | + | 7925271 - 7926836 | 57777.4 |
| cell shape-determining protein ccma | SLIN_RS32065 | Not Available | + | 7927147 - 7928241 | 38882.8 |
| hypothetical protein | SLIN_RS32070 | Not Available | - | 7928245 - 7928550 | 11059.6 |
| glycosyl hydrolase | SLIN_RS32075 | P49425 | + | 7928774 - 7930177 | 52161.9 |
| pas domain-containing protein | SLIN_RS32080 | Not Available | - | 7930275 - 7932083 | 66992.3 |
| duf6607 family protein | SLIN_RS32085 | Not Available | - | 7932846 - 7933775 | 35493.9 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)