Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | SLIN_RS31840 | Not Available | - | 7870018 - 7870587 | 21871.1 |
| hypothetical protein | SLIN_RS31845 | Not Available | - | 7870749 - 7871249 | 19132.8 |
| response regulator transcription factor | SLIN_RS31850 | P0AF30 | + | 7871517 - 7872176 | 24566.9 |
| 7tm diverse intracellular signaling domain-containing protein | SLIN_RS31855 | Not Available | - | 7872206 - 7874116 | 72509.1 |
| hypothetical protein | SLIN_RS31860 | Not Available | + | 7874385 - 7874720 | 12940.5 |
| Trna-met | Not Available | Not Available | + | 7875071 - 7875147 | Not Available |
| hd domain-containing protein | SLIN_RS31870 | P39651 | + | 7875273 - 7876535 | 48086.4 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | SLIN_RS31875 | Q11WA1 | + | 7876686 - 7877714 | 36480.8 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | SLIN_RS31880 | Q8A015 | + | 7877834 - 7879228 | 51696.7 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | SLIN_RS31885 | Q2LVL6 | + | 7879279 - 7880076 | 29541.2 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)