Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| caspase family protein | SLIN_RS31740 | Not Available | + | 7837735 - 7839270 | 57627.5 |
| hypothetical protein | SLIN_RS31745 | Not Available | + | 7839333 - 7840775 | 53718.9 |
| m48 family metalloprotease | SLIN_RS31750 | P66951 | + | 7841669 - 7842079 | 15292.8 |
| caspase family protein | SLIN_RS31755 | Not Available | + | 7842625 - 7843791 | 44042.1 |
| duf2610 domain-containing protein | SLIN_RS31760 | Q8YV57 | + | 7843808 - 7847632 | 144400.0 |
| is21-like element helper atpase istb | SLIN_RS31765 | P55923 | - | 7847799 - 7848542 | 28501.4 |
| is21 family transposase | SLIN_RS31770 | P55379 | - | 7848591 - 7850132 | 59042.6 |
| hypothetical protein | SLIN_RS31775 | Not Available | + | 7850372 - 7850830 | 16570.4 |
| tetratricopeptide repeat protein | SLIN_RS31780 | Not Available | - | 7850911 - 7852341 | 53358.7 |
| hypothetical protein | SLIN_RS31785 | Not Available | - | 7852413 - 7853879 | 56279.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)