Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS31540 | Not Available | - | 7786401 - 7786706 | 11216.5 |
| hypothetical protein | SLIN_RS31545 | Not Available | + | 7787235 - 7787777 | 19922.1 |
| carboxylesterase | SLIN_RS31550 | Not Available | + | 7787779 - 7788711 | 34351.2 |
| duf3575 domain-containing protein | SLIN_RS31555 | Not Available | - | 7788789 - 7789400 | 23022.1 |
| 7tm diverse intracellular signaling domain-containing protein | SLIN_RS31560 | Not Available | - | 7789566 - 7791227 | 63457.7 |
| alpha-l-rhamnosidase c-terminal domain-containing protein | SLIN_RS31565 | Not Available | - | 7791382 - 7793655 | 84685.4 |
| glycoside hydrolase family 43 protein | SLIN_RS31570 | Not Available | - | 7793683 - 7794660 | 36814.8 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS31575 | Not Available | - | 7794715 - 7796343 | 60650.4 |
| susc/raga family tonb-linked outer membrane protein | SLIN_RS31580 | T2KPJ3 | - | 7796368 - 7799268 | 105222.0 |
| family 16 glycosylhydrolase | SLIN_RS31585 | Not Available | - | 7799883 - 7800743 | 32703.4 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)