Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | SLIN_RS31440 | Not Available | + | 7761006 - 7762109 | 41928.6 |
| hypothetical protein | SLIN_RS31445 | Not Available | + | 7762287 - 7763243 | 34387.2 |
| endo-1,4-beta-xylanase | SLIN_RS31450 | P10474 | - | 7763330 - 7764493 | 43904.2 |
| hypothetical protein | SLIN_RS31455 | Not Available | - | 7765375 - 7766220 | 30704.8 |
| winged helix-turn-helix domain-containing protein | SLIN_RS31460 | Not Available | + | 7767350 - 7767817 | 17654.3 |
| transposase | SLIN_RS31465 | Not Available | + | 7767978 - 7768232 | 10091.4 |
| nad-dependent epimerase/dehydratase family protein | SLIN_RS31470 | Not Available | + | 7768916 - 7769989 | 40912.2 |
| wecb/taga/cpsf family glycosyltransferase | SLIN_RS31475 | Q6CZF2 | - | 7770108 - 7770890 | 29230.4 |
| glycosyltransferase family 9 protein | SLIN_RS31480 | P45042 | - | 7771343 - 7772332 | 37793.2 |
| hypothetical protein | SLIN_RS31485 | Not Available | - | 7772329 - 7773948 | 58457.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)