Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| t9ss c-terminal target domain-containing protein | SLIN_RS31340 | Not Available | + | 7739488 - 7741479 | 71294.9 |
| ybab/ebfc family nucleoid-associated protein | SLIN_RS31345 | Q5QWR0 | + | 7741535 - 7741864 | 11929.6 |
| glycosyltransferase family 2 protein | SLIN_RS31350 | Not Available | + | 7741983 - 7743005 | 38705.4 |
| pspc domain-containing protein | SLIN_RS31355 | Not Available | - | 7743082 - 7743303 | 8682.82 |
| cold-shock protein | SLIN_RS31360 | P57407 | + | 7743642 - 7743848 | 7724.22 |
| lysine--trna ligase | SLIN_RS31365 | A6L7P5 | - | 7743954 - 7745705 | 66689.0 |
| spfh domain-containing protein | SLIN_RS31370 | Not Available | + | 7745914 - 7746768 | 30814.8 |
| ribbon-helix-helix domain-containing protein | SLIN_RS31375 | Not Available | + | 7746867 - 7747061 | 7489.96 |
| type iii pantothenate kinase | SLIN_RS31380 | O83446 | - | 7747178 - 7747960 | 27632.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | SLIN_RS31385 | Q87RD1 | - | 7748045 - 7748752 | 25537.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)