Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sgcj/ecac family oxidoreductase | SLIN_RS31140 | Not Available | - | 7696452 - 7696961 | 18423.7 |
| type 1 glutamine amidotransferase domain-containing protein | SLIN_RS31145 | O06006 | - | 7697101 - 7697670 | 20726.6 |
| helix-turn-helix transcriptional regulator | SLIN_RS31150 | Not Available | + | 7697941 - 7698210 | 9964.01 |
| alkene reductase | SLIN_RS31155 | E9AGH7 | + | 7698303 - 7699394 | 39325.3 |
| phosphoribosylformylglycinamidine synthase subunit purq | SLIN_RS31160 | Q1IPG4 | - | 7699529 - 7700215 | 24804.8 |
| dipeptide epimerase | SLIN_RS31165 | A5FHW9 | + | 7700389 - 7701411 | 37704.1 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | SLIN_RS31170 | Q3SLX9 | + | 7701408 - 7702490 | 39712.2 |
| sugar phosphate isomerase/epimerase | SLIN_RS31175 | Not Available | - | 7702473 - 7703312 | 30926.0 |
| duf1338 domain-containing protein | SLIN_RS31180 | Not Available | - | 7703392 - 7704300 | 34266.1 |
| acyl-[acyl-carrier-protein] thioesterase | SLIN_RS31185 | Q39473 | - | 7704315 - 7705058 | 28247.8 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)