Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| co2+/mg2+ efflux protein apag | SLIN_RS01230 | B2S946 | + | 325629 - 326015 | 14401.3 |
| o-methyltransferase | SLIN_RS01235 | Not Available | + | 326019 - 326798 | 29591.8 |
| hypothetical protein | SLIN_RS01240 | Not Available | + | 326856 - 328220 | 49991.4 |
| dead/deah box helicase | SLIN_RS01245 | Q73EU1 | - | 328572 - 330731 | 79923.4 |
| duf2905 family protein | SLIN_RS01250 | Not Available | + | 331232 - 331435 | 7448.63 |
| hypothetical protein | SLIN_RS01255 | Not Available | - | 331404 - 332975 | 60167.4 |
| tim barrel protein | SLIN_RS01260 | Not Available | - | 333168 - 333941 | 29237.6 |
| class ii fructose-bisphosphate aldolase | SLIN_RS01265 | O52402 | + | 334182 - 335261 | 39525.8 |
| uma2 family endonuclease | SLIN_RS01270 | Not Available | + | 335367 - 335864 | 18561.0 |
| efflux rnd transporter permease subunit | SLIN_RS01275 | Not Available | + | 336298 - 339612 | 119219.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)