Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trab/gumn family protein | SLIN_RS30990 | Not Available | - | 7663776 - 7664633 | 32045.2 |
| flavin reductase family protein | SLIN_RS30995 | Not Available | - | 7664713 - 7665597 | 32009.4 |
| hypothetical protein | SLIN_RS31000 | Not Available | - | 7665590 - 7666246 | 23378.5 |
| hypothetical protein | SLIN_RS31005 | Not Available | - | 7666243 - 7666626 | 14473.1 |
| fumarylacetoacetase | SLIN_RS31010 | A5PKH3 | - | 7666818 - 7667990 | 43229.5 |
| marr family winged helix-turn-helix transcriptional regulator | SLIN_RS31015 | Not Available | - | 7668006 - 7668443 | 16835.0 |
| phenylalanine 4-monooxygenase | SLIN_RS31020 | Q8XU39 | - | 7668564 - 7669286 | 27907.0 |
| 4-hydroxyphenylpyruvate dioxygenase | SLIN_RS31025 | Q9S2F4 | - | 7669375 - 7670508 | 42738.5 |
| homogentisate 1,2-dioxygenase | SLIN_RS31030 | Q97Y16 | - | 7670551 - 7671741 | 45149.7 |
| sugar phosphate nucleotidyltransferase | SLIN_RS31035 | Not Available | + | 7672045 - 7672956 | 33710.8 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)