Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | SLIN_RS30940 | Not Available | - | 7652079 - 7653248 | 43913.2 |
| glycosyltransferase family 4 protein | SLIN_RS30945 | Not Available | - | 7653391 - 7654425 | 38775.9 |
| lipopolysaccharide biosynthesis protein | SLIN_RS30950 | Not Available | - | 7654440 - 7655741 | 46937.1 |
| upxy family transcription antiterminator | SLIN_RS30955 | Not Available | - | 7655908 - 7656390 | 18512.7 |
| tyrosine-protein kinase | SLIN_RS30960 | O52788 | - | 7656441 - 7658759 | 86749.7 |
| polysaccharide biosynthesis/export family protein | SLIN_RS30965 | Not Available | - | 7658807 - 7659637 | 30449.2 |
| sugar transferase | SLIN_RS30970 | P71241 | - | 7659685 - 7660203 | 20230.9 |
| m50 family metallopeptidase | SLIN_RS30975 | Not Available | - | 7661452 - 7662624 | 43329.6 |
| hypothetical protein | SLIN_RS30980 | Not Available | - | 7662628 - 7663266 | 24504.6 |
| rna polymerase sigma factor | SLIN_RS30985 | Not Available | - | 7663269 - 7663757 | 19085.2 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)