Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | SLIN_RS30840 | Not Available | + | 7620425 - 7620826 | 15374.5 |
| rna polymerase sigma-70 factor | SLIN_RS30845 | Not Available | + | 7620935 - 7621618 | 26252.6 |
| fecr family protein | SLIN_RS30850 | Not Available | + | 7621687 - 7622688 | 38345.9 |
| tonb-dependent receptor | SLIN_RS30855 | Not Available | + | 7622990 - 7626496 | 128231.0 |
| ragb/susd family nutrient uptake outer membrane protein | SLIN_RS30860 | Not Available | + | 7626527 - 7628122 | 58902.8 |
| arylsulfatase | SLIN_RS30865 | Not Available | + | 7628246 - 7629817 | 58903.4 |
| sulfatase | SLIN_RS30870 | P50428 | + | 7629943 - 7631403 | 53388.7 |
| ricin domain-containing protein | SLIN_RS30875 | Not Available | + | 7632265 - 7635888 | 131282.0 |
| nad-dependent epimerase/dehydratase family protein | SLIN_RS30880 | Not Available | - | 7636105 - 7637178 | 40450.6 |
| pa14 domain-containing protein | SLIN_RS30885 | Not Available | - | 7637812 - 7641756 | 144509.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)