Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS01180 | Not Available | + | 315747 - 317732 | 75793.7 |
| element excision factor xish family protein | SLIN_RS01185 | Not Available | + | 317868 - 318284 | 16178.4 |
| xisi protein | SLIN_RS01190 | Not Available | + | 318269 - 318616 | 13153.5 |
| spasm domain-containing protein | SLIN_RS01195 | Not Available | + | 318650 - 319672 | 39138.7 |
| para family protein | SLIN_RS01200 | Q9K5N0 | + | 319847 - 320629 | 28367.3 |
| parb/repb/spo0j family partition protein | SLIN_RS01205 | Q9PB63 | + | 320732 - 321646 | 34477.5 |
| duf5683 domain-containing protein | SLIN_RS01210 | Not Available | + | 321729 - 322592 | 31359.8 |
| 4-hydroxy-tetrahydrodipicolinate reductase | SLIN_RS01215 | A0LZI4 | + | 322654 - 323388 | 27079.2 |
| signal peptidase i | SLIN_RS01220 | Not Available | + | 323521 - 324693 | 44757.7 |
| uracil-dna glycosylase | SLIN_RS01225 | A0M1V1 | - | 324818 - 325483 | 24539.2 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)