Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | SLIN_RS30390 | Not Available | + | 7505366 - 7506670 | 47522.5 |
| s9 family peptidase | SLIN_RS30395 | Not Available | + | 7506672 - 7508108 | 53039.8 |
| mannonate dehydratase | SLIN_RS30400 | A9MQM1 | + | 7508242 - 7509441 | 45001.9 |
| alpha-glucuronidase family glycosyl hydrolase | SLIN_RS30405 | B3PC73 | + | 7509604 - 7511727 | 79418.7 |
| sdr family nad(p)-dependent oxidoreductase | SLIN_RS30410 | Not Available | + | 7511745 - 7512527 | 27519.1 |
| gnat family n-acetyltransferase | SLIN_RS30415 | Not Available | + | 7512636 - 7513157 | 19929.9 |
| alkaline phosphatase family protein | SLIN_RS30420 | Not Available | + | 7513252 - 7514493 | 47014.6 |
| duf2147 domain-containing protein | SLIN_RS30425 | Not Available | - | 7514575 - 7515030 | 17204.9 |
| hypothetical protein | SLIN_RS30430 | Not Available | + | 7515520 - 7516425 | 34451.6 |
| hypothetical protein | SLIN_RS30435 | Not Available | + | 7516436 - 7517047 | 22461.6 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)