Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | SLIN_RS30340 | Q6F3I7 | + | 7489127 - 7491328 | 82705.7 |
| dash family cryptochrome | SLIN_RS30345 | Q7NMD1 | - | 7491673 - 7493136 | 56282.9 |
| tonb family protein | SLIN_RS30350 | Not Available | - | 7493230 - 7494648 | 52360.6 |
| tonb family protein | SLIN_RS30355 | Not Available | - | 7494648 - 7495367 | 26444.8 |
| tonb family protein | SLIN_RS30360 | Not Available | - | 7495443 - 7497062 | 59293.2 |
| blai/meci/copy family transcriptional regulator | SLIN_RS30365 | Not Available | - | 7497059 - 7497430 | 14588.7 |
| glycoside hydrolase family 2 | SLIN_RS30370 | P24131 | - | 7497696 - 7499510 | 68455.3 |
| glutaminase domain-containing protein | SLIN_RS30375 | Q2U4L7 | - | 7499650 - 7502166 | 92776.2 |
| rraa family protein | SLIN_RS30380 | Not Available | + | 7502671 - 7503615 | 35335.5 |
| mandelate racemase/muconate lactonizing enzyme family protein | SLIN_RS30385 | D4GP40 | + | 7503743 - 7505020 | 46850.4 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)