Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is5/is1182 family transposase | SLIN_RS30290 | Not Available | + | 7477667 - 7478122 | 17301.8 |
| crp/fnr family transcriptional regulator | SLIN_RS30295 | Not Available | + | 7478226 - 7478864 | 24642.1 |
| tsup family transporter | SLIN_RS30300 | Q87AD2 | + | 7479037 - 7479840 | 28530.4 |
| duf2892 domain-containing protein | SLIN_RS30305 | Not Available | + | 7479954 - 7480169 | 7673.88 |
| rhodanese-like domain-containing protein | SLIN_RS30310 | Not Available | + | 7480488 - 7481900 | 51279.3 |
| family 16 glycosylhydrolase | SLIN_RS30315 | Not Available | + | 7482561 - 7483340 | 29677.8 |
| dead/deah box helicase | SLIN_RS30320 | P75093 | + | 7483870 - 7486881 | 115696.0 |
| phosphoribosyltransferase family protein | SLIN_RS30325 | A5D172 | - | 7487258 - 7487770 | 18955.9 |
| duf4783 domain-containing protein | SLIN_RS30330 | Not Available | + | 7487905 - 7488327 | 16170.3 |
| ycxb family protein | SLIN_RS30335 | Not Available | + | 7488452 - 7489036 | 22378.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)