Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | SLIN_RS01130 | A5FGS7 | + | 302388 - 303101 | 27071.0 |
| t9ss c-terminal target domain-containing protein | SLIN_RS01135 | Not Available | - | 303138 - 306029 | 104703.0 |
| t9ss c-terminal target domain-containing protein | SLIN_RS01140 | Not Available | - | 306219 - 309110 | 104441.0 |
| circularly permuted type 2 atp-grasp protein | SLIN_RS01145 | Q55587 | - | 309231 - 310736 | 56119.3 |
| pepsy-like domain-containing protein | SLIN_RS01150 | Not Available | + | 311080 - 311754 | 23326.6 |
| hypothetical protein | SLIN_RS01155 | Not Available | + | 311977 - 312183 | 7516.16 |
| hypothetical protein | SLIN_RS01160 | Not Available | + | 312145 - 312339 | 6999.21 |
| aldo/keto reductase | SLIN_RS01165 | P46905 | - | 312645 - 313631 | 36743.4 |
| ldh family oxidoreductase | SLIN_RS01170 | Q9V0D5 | - | 313819 - 314886 | 37867.4 |
| hypothetical protein | SLIN_RS01175 | Not Available | + | 314992 - 315573 | 22210.2 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)