Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS30040 | Not Available | + | 7418506 - 7420095 | 59240.7 |
| atp-binding protein | SLIN_RS30045 | Not Available | + | 7420144 - 7422756 | 99080.9 |
| rna polymerase sigma factor | SLIN_RS30050 | Not Available | - | 7422935 - 7423498 | 22178.6 |
| lyttr family transcriptional regulator dna-binding domain-containing protein | SLIN_RS30055 | Not Available | - | 7423580 - 7423906 | 12733.9 |
| lyttr family dna-binding domain-containing protein | SLIN_RS30060 | P62646 | + | 7424281 - 7424997 | 27393.5 |
| sensor histidine kinase kdpd | SLIN_RS30065 | Not Available | + | 7425130 - 7427016 | 70738.7 |
| hint domain-containing protein | SLIN_RS30070 | Not Available | - | 7427071 - 7428078 | 36239.3 |
| flavin monoamine oxidase family protein | SLIN_RS30075 | Q8VPD4 | - | 7428154 - 7429728 | 57891.7 |
| histidinol-phosphate transaminase | SLIN_RS30080 | Q2RL44 | - | 7429824 - 7430996 | 42699.8 |
| lipocalin family protein | SLIN_RS30085 | Not Available | - | 7431382 - 7431837 | 16702.4 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)