Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS29640 | Not Available | - | 7318626 - 7319198 | 21846.2 |
| dihydrolipoyl dehydrogenase | SLIN_RS29645 | Q9M5K3 | + | 7319433 - 7320833 | 50524.1 |
| duf4160 domain-containing protein | SLIN_RS29650 | Not Available | + | 7320936 - 7321205 | 10066.5 |
| duf2442 domain-containing protein | SLIN_RS29655 | Not Available | + | 7321212 - 7321457 | 9399.17 |
| m28 family peptidase | SLIN_RS29660 | Q17QK3 | + | 7321597 - 7322961 | 48896.8 |
| susc/raga family tonb-linked outer membrane protein | SLIN_RS29665 | Not Available | + | 7323315 - 7326440 | 113823.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | SLIN_RS29670 | Not Available | + | 7326442 - 7327893 | 52596.7 |
| hypothetical protein | SLIN_RS29675 | Not Available | - | 7327898 - 7329568 | 62446.7 |
| nadh-quinone oxidoreductase subunit c | SLIN_RS29680 | B3QY46 | - | 7329646 - 7330137 | 18905.5 |
| hypothetical protein | SLIN_RS29685 | Not Available | - | 7330208 - 7330459 | 9513.35 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)