Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-acetyltransferase | SLIN_RS01080 | K4ICC9 | + | 290913 - 291992 | 39549.8 |
| sgnh/gdsl hydrolase family protein | SLIN_RS01085 | Not Available | + | 291999 - 292592 | 22573.9 |
| esterase family protein | SLIN_RS01090 | Not Available | + | 292667 - 293395 | 28526.9 |
| meta domain-containing protein | SLIN_RS01095 | Not Available | - | 293414 - 294868 | 54074.9 |
| amine oxidase | SLIN_RS01100 | Not Available | - | 294934 - 296118 | 44954.4 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | SLIN_RS01105 | C5D4X9 | - | 296312 - 297151 | 29891.4 |
| ncs2 family permease | SLIN_RS01110 | P31466 | - | 297408 - 298718 | 46389.6 |
| glucosamine-6-phosphate deaminase | SLIN_RS01115 | B0K934 | - | 298781 - 299512 | 26452.8 |
| alkaline phosphatase | SLIN_RS01120 | Not Available | - | 299588 - 301003 | 53288.2 |
| diaminopimelate decarboxylase | SLIN_RS01125 | O27390 | + | 301046 - 302320 | 47107.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)