Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS29590 | Not Available | + | 7307809 - 7308360 | 20176.3 |
| peptidylprolyl isomerase | SLIN_RS29595 | Not Available | + | 7308542 - 7310662 | 77321.3 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | SLIN_RS29600 | A6LGA4 | - | 7310968 - 7311546 | 21174.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SLIN_RS29605 | O08437 | - | 7311610 - 7312524 | 32564.2 |
| bifunctional oligoribonuclease/pap phosphatase nrna | SLIN_RS29610 | Q5SM25 | - | 7312642 - 7313673 | 38048.8 |
| nucleoside-diphosphate kinase | SLIN_RS29615 | A5F9Z6 | + | 7313868 - 7314287 | 15173.0 |
| endonuclease iii | SLIN_RS29620 | Q4UK93 | - | 7314350 - 7314997 | 24401.7 |
| hypothetical protein | SLIN_RS29625 | Not Available | - | 7315126 - 7315377 | 9652.54 |
| rna polymerase sigma factor | SLIN_RS29630 | Not Available | - | 7315352 - 7315951 | 23470.2 |
| tetratricopeptide repeat protein | SLIN_RS29635 | Not Available | + | 7316449 - 7318629 | 83469.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)