Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yafy family protein | SLIN_RS29540 | Not Available | + | 7293395 - 7294288 | 34295.6 |
| hypothetical protein | SLIN_RS29545 | Not Available | + | 7295085 - 7296869 | 68376.8 |
| type i-b crispr-associated protein cas7/cst2/devr | SLIN_RS29550 | Not Available | + | 7296875 - 7297774 | 32775.0 |
| crispr-associated protein cas5 | SLIN_RS29555 | Not Available | + | 7297786 - 7298499 | 26061.2 |
| crispr-associated helicase/endonuclease cas3 | SLIN_RS29560 | O27158 | + | 7298499 - 7300787 | 88211.1 |
| crispr-associated endonuclease cas6 | SLIN_RS29565 | Q58388 | + | 7300794 - 7301522 | 27995.0 |
| crispr-associated endonuclease cas1 | SLIN_RS29570 | O28401 | + | 7301602 - 7302657 | 39274.3 |
| crispr-associated endonuclease cas2 | SLIN_RS29575 | Not Available | + | 7302654 - 7302944 | 11194.6 |
| crispr-associated protein cas4 | SLIN_RS29580 | Not Available | + | 7302947 - 7303534 | 22923.6 |
| thioredoxin family protein | SLIN_RS29585 | Not Available | + | 7307064 - 7307684 | 23059.4 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)