Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS29490 | Not Available | - | 7277882 - 7278727 | 33414.6 |
| adenylyltransferase/cytidyltransferase family protein | SLIN_RS29495 | Q5IW36 | - | 7278724 - 7279287 | 21825.6 |
| is110 family transposase | SLIN_RS29500 | Not Available | + | 7279614 - 7280621 | 37860.4 |
| air synthase related protein | SLIN_RS29505 | Q57656 | + | 7280940 - 7282109 | 42240.4 |
| t9ss type a sorting domain-containing protein | SLIN_RS29510 | Not Available | + | 7282176 - 7283276 | 39678.8 |
| endonuclease/exonuclease/phosphatase family protein | SLIN_RS29515 | Not Available | + | 7283481 - 7286528 | 106553.0 |
| efflux rnd transporter permease subunit | SLIN_RS29520 | Q57MM5 | - | 7286650 - 7289730 | 111983.0 |
| efflux rnd transporter periplasmic adaptor subunit | SLIN_RS29525 | Q57500 | - | 7289824 - 7290894 | 37998.5 |
| tolc family protein | SLIN_RS29530 | Not Available | - | 7291161 - 7292549 | 51937.9 |
| tetr/acrr family transcriptional regulator | SLIN_RS29535 | Not Available | - | 7292592 - 7293203 | 23700.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)