Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s8 family serine peptidase | SLIN_RS29440 | Not Available | - | 7262883 - 7266938 | 142753.0 |
| hypothetical protein | SLIN_RS29445 | Not Available | - | 7267251 - 7268282 | 38577.6 |
| duf1800 family protein | SLIN_RS29450 | Not Available | + | 7268634 - 7270070 | 54792.7 |
| duf1501 domain-containing protein | SLIN_RS29455 | Not Available | + | 7270162 - 7271409 | 45520.1 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SLIN_RS29460 | Q9WYS7 | + | 7271600 - 7272082 | 16911.7 |
| lysm peptidoglycan-binding domain-containing protein | SLIN_RS29465 | Not Available | + | 7272101 - 7272913 | 28707.9 |
| duf481 domain-containing protein | SLIN_RS29470 | Not Available | - | 7273131 - 7273982 | 32459.5 |
| gfo/idh/moca family protein | SLIN_RS29475 | Q642M9 | + | 7274090 - 7275055 | 34892.2 |
| is110 family transposase | SLIN_RS29480 | Not Available | - | 7275350 - 7276705 | 50760.6 |
| nudix domain-containing protein | SLIN_RS29485 | Not Available | - | 7277292 - 7277879 | 23150.1 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)