Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phytoene/squalene synthase family protein | SLIN_RS29290 | P54977 | - | 7224372 - 7225208 | 32505.3 |
| nad(p)/fad-dependent oxidoreductase | SLIN_RS29295 | A0A0A1GKA2 | - | 7225303 - 7226775 | 55468.4 |
| rna polymerase sigma factor | SLIN_RS29300 | Q7AKG9 | - | 7227112 - 7227627 | 19844.7 |
| sis domain-containing protein | SLIN_RS29305 | Q9HVW0 | - | 7227977 - 7228945 | 34812.2 |
| dna helicase recq | SLIN_RS29310 | P40724 | + | 7229052 - 7231262 | 84041.6 |
| phosphoribosylamine--glycine ligase | SLIN_RS29315 | Q9KV81 | + | 7231346 - 7232632 | 45943.2 |
| regulatory iron-sulfur-containing complex subunit rict | SLIN_RS29320 | P37541 | + | 7232868 - 7233911 | 39525.8 |
| hypothetical protein | SLIN_RS29325 | Not Available | - | 7233951 - 7234910 | 37346.5 |
| m56 family metallopeptidase | SLIN_RS29330 | Not Available | - | 7236017 - 7236784 | 29630.4 |
| blai/meci/copy family transcriptional regulator | SLIN_RS29335 | Not Available | - | 7236884 - 7237243 | 14121.9 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)