Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | SLIN_RS29190 | Not Available | - | 7198667 - 7199542 | 34513.1 |
| fad-dependent oxidoreductase | SLIN_RS29195 | Q10499 | + | 7199664 - 7201244 | 57554.6 |
| 3'-5' exonuclease | SLIN_RS29200 | Not Available | + | 7201301 - 7202113 | 30468.9 |
| nadh-quinone oxidoreductase subunit nuok | SLIN_RS29205 | A5FKJ7 | + | 7202242 - 7202586 | 12694.1 |
| nadh-quinone oxidoreductase subunit l | SLIN_RS29210 | P29924 | + | 7202718 - 7204646 | 69612.6 |
| nuom family protein | SLIN_RS29215 | Q92G96 | + | 7204697 - 7206175 | 54530.0 |
| nadh-quinone oxidoreductase subunit n | SLIN_RS29220 | B3E9V6 | + | 7206256 - 7207659 | 50775.6 |
| gtra family protein | SLIN_RS29225 | Not Available | + | 7207773 - 7208264 | 18264.4 |
| hypothetical protein | SLIN_RS29230 | Not Available | + | 7208430 - 7208621 | 6490.59 |
| sprt-like domain-containing protein | SLIN_RS29235 | Not Available | + | 7208689 - 7209303 | 23652.6 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)