Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | SLIN_RS01030 | Q9Y140 | - | 280236 - 281027 | 28655.9 |
| ld-carboxypeptidase | SLIN_RS01035 | O34851 | - | 281034 - 281945 | 33113.6 |
| ion channel | SLIN_RS01040 | D9N164 | - | 282018 - 283010 | 37651.0 |
| na+/h+ antiporter | SLIN_RS01045 | P9WJI2 | + | 283121 - 284722 | 58590.9 |
| glycosyltransferase family 2 protein | SLIN_RS01050 | O34319 | + | 284927 - 285922 | 37838.9 |
| duf3473 domain-containing protein | SLIN_RS01055 | Not Available | + | 285859 - 286662 | 30632.5 |
| glycosyltransferase family 87 protein | SLIN_RS01060 | Not Available | + | 286697 - 287866 | 45174.1 |
| class i sam-dependent methyltransferase | SLIN_RS01065 | Not Available | + | 287935 - 288636 | 27063.6 |
| duf721 domain-containing protein | SLIN_RS01070 | Not Available | - | 288670 - 288996 | 12518.2 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | SLIN_RS01075 | P50125 | + | 289522 - 290835 | 47149.6 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)