Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | SLIN_RS29090 | Q9K1G9 | - | 7174156 - 7175472 | 47476.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | SLIN_RS29095 | Q5L9P6 | - | 7175659 - 7176831 | 42879.0 |
| hypothetical protein | SLIN_RS29100 | Not Available | - | 7176828 - 7177427 | 23496.9 |
| aaa family atpase | SLIN_RS29105 | Not Available | - | 7177414 - 7178799 | 52257.5 |
| gh3 auxin-responsive promoter family protein | SLIN_RS29110 | Not Available | - | 7178813 - 7180315 | 56548.6 |
| rod shape-determining protein | SLIN_RS29115 | A0A0H3C7V4 | + | 7180520 - 7181545 | 36933.2 |
| rod shape-determining protein mrec | SLIN_RS29120 | Not Available | + | 7181620 - 7182456 | 31127.0 |
| hypothetical protein | SLIN_RS29125 | Not Available | + | 7182524 - 7183030 | 19021.2 |
| gaf domain-containing protein | SLIN_RS29130 | Q8MTJ7 | + | 7183034 - 7183516 | 17415.8 |
| hypothetical protein | SLIN_RS29135 | Not Available | + | 7183665 - 7184108 | 16209.4 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)