Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf433 domain-containing protein | SLIN_RS29040 | Not Available | - | 7161645 - 7161878 | 8279.07 |
| threonine ammonia-lyase | SLIN_RS29045 | Q9KC63 | - | 7161900 - 7163174 | 47213.0 |
| ketol-acid reductoisomerase | SLIN_RS29050 | A8ZTR0 | - | 7163302 - 7164345 | 38212.3 |
| acetolactate synthase small subunit | SLIN_RS29055 | Not Available | - | 7164387 - 7164920 | 20734.2 |
| biosynthetic-type acetolactate synthase large subunit | SLIN_RS29060 | P37251 | - | 7164922 - 7166688 | 64215.5 |
| dihydroxy-acid dehydratase | SLIN_RS29065 | A6GWT7 | - | 7166778 - 7168478 | 60083.4 |
| n-acetylmuramic acid 6-phosphate etherase | SLIN_RS29070 | A0M6M4 | + | 7168604 - 7169416 | 28791.8 |
| age family epimerase/isomerase | SLIN_RS29075 | Not Available | - | 7169548 - 7170795 | 47454.5 |
| endopeptidase la | SLIN_RS29080 | Q11QT1 | - | 7170894 - 7173383 | 93602.6 |
| duf6702 family protein | SLIN_RS29085 | Not Available | - | 7173555 - 7173965 | 15801.8 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)