Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | SLIN_RS28985 | Not Available | - | 7150027 - 7150719 | 26030.3 |
| alpha-isopropylmalate synthase regulatory domain-containing protein | SLIN_RS28990 | Q8F3Q1 | - | 7150802 - 7152322 | 56251.3 |
| 3-isopropylmalate dehydratase small subunit | SLIN_RS28995 | Q11NN7 | - | 7152421 - 7153017 | 22258.2 |
| 3-isopropylmalate dehydratase large subunit | SLIN_RS29000 | A5FKC6 | - | 7153119 - 7154531 | 50642.5 |
| duf4357 domain-containing protein | SLIN_RS29005 | Not Available | - | 7154934 - 7155779 | 31796.1 |
| abiv family abortive infection protein | SLIN_RS29010 | Not Available | - | 7155953 - 7156528 | 21763.0 |
| doxx family protein | SLIN_RS29020 | Not Available | - | 7159327 - 7159734 | 14796.5 |
| helix-turn-helix domain-containing protein | SLIN_RS29025 | P42406 | + | 7159842 - 7160180 | 12587.4 |
| response regulator transcription factor | SLIN_RS29030 | Not Available | - | 7160282 - 7161142 | 33321.8 |
| duf5615 family pin-like protein | SLIN_RS29035 | Not Available | - | 7161259 - 7161645 | 14618.7 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)