Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exonuclease | SLIN_RS28835 | Not Available | - | 7117522 - 7118259 | 28519.3 |
| hypothetical protein | SLIN_RS28840 | Not Available | - | 7118311 - 7118715 | 15340.4 |
| lipoyl(octanoyl) transferase lipb | SLIN_RS28845 | A5FIL6 | - | 7118798 - 7119535 | 27530.7 |
| yran family protein | SLIN_RS28850 | A0M5Z7 | + | 7119637 - 7119990 | 13477.0 |
| s41 family peptidase | SLIN_RS28855 | Not Available | + | 7120095 - 7121579 | 53400.9 |
| hypothetical protein | SLIN_RS28860 | Not Available | + | 7121668 - 7123158 | 56399.8 |
| hypothetical protein | SLIN_RS28865 | Not Available | + | 7123308 - 7123541 | 8725.65 |
| hypothetical protein | SLIN_RS28870 | Not Available | + | 7123947 - 7124225 | 10562.8 |
| duf6965 family protein | SLIN_RS28875 | Not Available | - | 7124575 - 7124889 | 11815.0 |
| retropepsin-like aspartic protease | SLIN_RS28880 | Not Available | + | 7125862 - 7126704 | 31284.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)