Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | SLIN_RS28685 | Not Available | + | 7084607 - 7085266 | 24691.6 |
| sdr family oxidoreductase | SLIN_RS28690 | O86034 | - | 7085314 - 7086102 | 27491.1 |
| lema family protein | SLIN_RS28695 | A8AVK0 | + | 7086249 - 7086830 | 21120.0 |
| tpm domain-containing protein | SLIN_RS28700 | Not Available | + | 7086924 - 7087358 | 16429.1 |
| tpm domain-containing protein | SLIN_RS28705 | Not Available | + | 7087351 - 7088214 | 29997.5 |
| duf5916 domain-containing protein | SLIN_RS28710 | Not Available | + | 7088470 - 7090692 | 83281.2 |
| d-sedoheptulose 7-phosphate isomerase | SLIN_RS28715 | A1JP02 | - | 7090904 - 7091476 | 20756.0 |
| hypothetical protein | SLIN_RS28720 | Not Available | - | 7091570 - 7093366 | 68127.4 |
| uracil phosphoribosyltransferase | SLIN_RS28725 | B2RIV3 | + | 7093500 - 7094147 | 23967.7 |
| outer membrane lipoprotein carrier protein lola | SLIN_RS28730 | Not Available | - | 7094289 - 7094930 | 23928.6 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)