Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diviva domain-containing protein | SLIN_RS28635 | Not Available | - | 7075180 - 7076076 | 33515.0 |
| wd40 repeat domain-containing protein | SLIN_RS28640 | Not Available | - | 7076182 - 7077096 | 33682.3 |
| 4'-phosphopantetheinyl transferase superfamily protein | SLIN_RS28645 | Not Available | + | 7077168 - 7077797 | 23803.8 |
| transglutaminase-like domain-containing protein | SLIN_RS28650 | Q9PD85 | - | 7077888 - 7078763 | 33906.5 |
| udp-glucose 4-epimerase gale | SLIN_RS28655 | O65781 | + | 7078894 - 7079925 | 37059.3 |
| dtdp-glucose 4,6-dehydratase | SLIN_RS28660 | P26391 | + | 7080018 - 7081076 | 39567.6 |
| glucose-1-phosphate thymidylyltransferase rfba | SLIN_RS28665 | P55254 | + | 7081197 - 7082057 | 31512.2 |
| hypothetical protein | SLIN_RS28670 | Not Available | + | 7082468 - 7082875 | 14782.7 |
| hypothetical protein | SLIN_RS28675 | Not Available | + | 7082889 - 7083566 | 25896.9 |
| sensor histidine kinase | SLIN_RS28680 | Q1M799 | + | 7083730 - 7084542 | 30255.5 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)