Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipocalin family protein | SLIN_RS28535 | Not Available | - | 7058534 - 7058944 | 14825.7 |
| nicotinamide riboside transporter pnuc | SLIN_RS28540 | P24520 | - | 7059097 - 7059771 | 26179.1 |
| gfo/idh/moca family protein | SLIN_RS28545 | P40332 | + | 7059850 - 7061043 | 44662.0 |
| uma2 family endonuclease | SLIN_RS28550 | Not Available | - | 7061084 - 7061551 | 17678.0 |
| sdr family nad(p)-dependent oxidoreductase | SLIN_RS28555 | Not Available | + | 7061718 - 7062500 | 27214.3 |
| gnat family n-acetyltransferase | SLIN_RS28560 | Not Available | + | 7062521 - 7063024 | 19189.2 |
| cobalamin-independent methionine synthase ii family protein | SLIN_RS28565 | Q9YA91 | + | 7063068 - 7064096 | 37840.6 |
| acyl-coa thioesterase | SLIN_RS28570 | P0A0Q8 | - | 7064162 - 7064719 | 20463.7 |
| iron-sulfur cluster assembly accessory protein | SLIN_RS28575 | A1WVE3 | - | 7065041 - 7065367 | 11656.9 |
| methylmalonyl-coa epimerase | SLIN_RS28580 | O58010 | + | 7065520 - 7065927 | 14919.9 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)