Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s19 | SLIN_RS28385 | Q11QB6 | - | 7021604 - 7021882 | 10492.6 |
| 50s ribosomal protein l2 | SLIN_RS28390 | Q11QB5 | - | 7021892 - 7022716 | 29864.2 |
| 50s ribosomal protein l23 | SLIN_RS28395 | A4J113 | - | 7022747 - 7023034 | 10519.0 |
| 50s ribosomal protein l4 | SLIN_RS28400 | Q11QB3 | - | 7023038 - 7023667 | 23038.7 |
| 50s ribosomal protein l3 | SLIN_RS28405 | Q11QB2 | - | 7023671 - 7024291 | 22100.8 |
| is200/is605 family transposase | SLIN_RS28410 | Not Available | - | 7024946 - 7025407 | 18262.9 |
| tim barrel protein | SLIN_RS28415 | Not Available | + | 7025796 - 7026740 | 33881.1 |
| sdr family oxidoreductase | SLIN_RS28420 | Q9LHT0 | - | 7026737 - 7027507 | 27219.6 |
| pitrilysin family protein | SLIN_RS28425 | Not Available | + | 7027557 - 7028900 | 50341.9 |
| pitrilysin family protein | SLIN_RS28430 | Not Available | + | 7028958 - 7030334 | 50804.5 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)