Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | SLIN_RS28235 | O14466 | - | 6997464 - 6998204 | 28071.1 |
| terc/alx family metal homeostasis membrane protein | SLIN_RS28240 | P96554 | + | 6998350 - 6999414 | 40757.4 |
| tonb-dependent receptor | SLIN_RS28245 | P25184 | + | 6999575 - 7001956 | 88047.9 |
| pepsy domain-containing protein | SLIN_RS28250 | Not Available | + | 7001975 - 7003141 | 43842.4 |
| aaa domain-containing protein | SLIN_RS28255 | P47386 | + | 7003212 - 7007270 | 153917.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | SLIN_RS28260 | Q8KGA2 | - | 7007327 - 7008430 | 40396.0 |
| 50s ribosomal protein l17 | SLIN_RS28265 | Q8A4A3 | - | 7008545 - 7009159 | 22197.2 |
| dna-directed rna polymerase subunit alpha | SLIN_RS28270 | Q11QD8 | - | 7009238 - 7010227 | 37492.3 |
| 30s ribosomal protein s4 | SLIN_RS28275 | Q11QD7 | - | 7010416 - 7011021 | 22995.8 |
| 30s ribosomal protein s11 | SLIN_RS28280 | Q11QD6 | - | 7011099 - 7011494 | 14205.4 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)