Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4249 family protein | SLIN_RS28135 | Not Available | - | 6972933 - 6973877 | 34669.2 |
| tonb-dependent receptor domain-containing protein | SLIN_RS28140 | Not Available | - | 6973898 - 6976312 | 90359.0 |
| nad(p)/fad-dependent oxidoreductase | SLIN_RS28145 | P95200 | + | 6976526 - 6977860 | 49470.0 |
| hypothetical protein | SLIN_RS28150 | Not Available | - | 6977955 - 6978782 | 32001.0 |
| s46 family peptidase | SLIN_RS28155 | A6L2J8 | + | 6979444 - 6981579 | 78729.7 |
| dinb family protein | SLIN_RS28160 | Not Available | + | 6981675 - 6982196 | 19801.9 |
| s9 family peptidase | SLIN_RS28165 | Not Available | + | 6982331 - 6984538 | 80891.8 |
| hypothetical protein | SLIN_RS28170 | Not Available | + | 6984652 - 6985311 | 24886.8 |
| nudix hydrolase | SLIN_RS28175 | Not Available | + | 6985500 - 6986180 | 25700.8 |
| nucleoside deaminase | SLIN_RS28180 | P78594 | + | 6986198 - 6986632 | 16006.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)